A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6907387



Internal ID10019890
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:163574204..163574336hg38UCSC Ensembl
Outerchr5:163001210..163001342hg19UCSC Ensembl
Cytoband5q34
Allele length
AssemblyAllele length
hg38133
hg19133
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2731011, esv2731009, esv2731010
Supporting Variants
SamplesSSM014
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6907387
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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