A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6906574



Internal ID9673935
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:199447759..199447931hg38UCSC Ensembl
Outerchr2:200312482..200312654hg19UCSC Ensembl
Cytoband2q33.1
Allele length
AssemblyAllele length
hg38173
hg19173
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2721352, esv2721353
Supporting Variants
SamplesSSM014
Known GenesSATB2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6906574
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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