A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6901546



Internal ID9946625
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr21:42714746..42714915hg38UCSC Ensembl
Outerchr21:44134856..44135025hg19UCSC Ensembl
Cytoband21q22.3
Allele length
AssemblyAllele length
hg38170
hg19170
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2723567, esv2723568
Supporting Variants
SamplesSSM100
Known GenesPDE9A
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6901546
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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