A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6900299



Internal ID9665595
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:132212268..132212537hg38UCSC Ensembl
Outerchr12:132696813..132697082hg19UCSC Ensembl
Cytoband12q24.33
Allele length
AssemblyAllele length
hg38270
hg19270
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2746924
Supporting Variants
SamplesSSM012
Known GenesGALNT9
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6900299
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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