A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6895559



Internal ID9942798
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:21119100..21656640hg38UCSC Ensembl
Outerchr19:21301903..21839442hg19UCSC Ensembl
Cytoband19p12
Allele length
AssemblyAllele length
hg38537541
hg19537540
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718325
Supporting Variants
SamplesSSM098
Known GenesLINC00664, ZNF429, ZNF431, ZNF493, ZNF708, ZNF714, ZNF738
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6895559
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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