A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6892126



Internal ID9939709
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:53185940..53188749hg38UCSC Ensembl
Outerchr19:53689193..53692002hg19UCSC Ensembl
Cytoband19q13.42
Allele length
AssemblyAllele length
hg382810
hg192810
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718787, esv2718812, esv2718813
Supporting Variants
SamplesSSM097
Known GenesZNF665
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6892126
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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