A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6891993



Internal ID9939589
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr20:23748711..23824971hg38UCSC Ensembl
Outerchr20:23729348..23805608hg19UCSC Ensembl
Cytoband20p11.21
Allele length
AssemblyAllele length
hg3876261
hg1976261
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2722308, esv2722305, esv2722309
Supporting Variants
SamplesSSM097
Known GenesCST1, CST2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6891993
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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