A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6888545



Internal ID10283349
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:41087369..41107303hg38UCSC Ensembl
Outerchr17:39243621..39263555hg19UCSC Ensembl
Cytoband17q21.2
Allele length
AssemblyAllele length
hg3819935
hg1919935
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2715915
Supporting Variants
SamplesSSM096
Known GenesKRTAP4-8, KRTAP4-9
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6888545
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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