A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6888179



Internal ID10283019
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:113541674..113541857hg38UCSC Ensembl
Outerchr13:114195989..114196172hg19UCSC Ensembl
Cytoband13q34
Allele length
AssemblyAllele length
hg38184
hg19184
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2748321, esv2748317, esv2748315, esv2748320
Supporting Variants
SamplesSSM096
Known GenesTMCO3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6888179
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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