A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6888020



Internal ID9936191
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:54459722..54460014hg38UCSC Ensembl
Outerchr12:54853506..54853798hg19UCSC Ensembl
Cytoband12q13.13
Allele length
AssemblyAllele length
hg38293
hg19293
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745917
Supporting Variants
SamplesSSM096
Known GenesGTSF1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6888020
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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