A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6887747



Internal ID9935944
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:17186567..17196263hg38UCSC Ensembl
Outerchr10:17228566..17238262hg19UCSC Ensembl
Cytoband10p13
Allele length
AssemblyAllele length
hg389697
hg199697
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2733606
Supporting Variants
SamplesSSM096
Known GenesTRDMT1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6887747
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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