A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6882277



Internal ID9930845
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:114554195..114561156hg38UCSC Ensembl
Outerchr11:114424917..114431878hg19UCSC Ensembl
Cytoband11q23.2
Allele length
AssemblyAllele length
hg386962
hg196962
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745098
Supporting Variants
SamplesSSM094
Known GenesNXPE1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6882277
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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