A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6880608



Internal ID9929344
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:10331801..10332193hg38UCSC Ensembl
Outerchr2:10471927..10472319hg19UCSC Ensembl
Cytoband2p25.1
Allele length
AssemblyAllele length
hg38393
hg19393
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2719650
Supporting Variants
SamplesSSM094
Known GenesHPCAL1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6880608
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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