A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6878002



Internal ID9926998
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr2:232338959..232449704hg38UCSC Ensembl
Outerchr2:233203669..233314414hg19UCSC Ensembl
Cytoband2q37.1
Allele length
AssemblyAllele length
hg38110746
hg19110746
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2721624, esv2721626
Supporting Variants
SamplesSSM093
Known GenesALPP, ALPPL2, DIS3L2, ECEL1P2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6878002
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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