A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6876666



Internal ID9925794
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:29783644..30170131hg38UCSC Ensembl
Outerchr12:29936577..30323064hg19UCSC Ensembl
Cytoband12p11.22
Allele length
AssemblyAllele length
hg38386488
hg19386488
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745689
Supporting Variants
SamplesSSM092
Known GenesTMTC1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6876666
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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