A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6876646



Internal ID9925776
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:11039836..11065461hg38UCSC Ensembl
Outerchr12:11192435..11218060hg19UCSC Ensembl
Cytoband12p13.2
Allele length
AssemblyAllele length
hg3825626
hg1925626
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745547, esv2745546
Supporting Variants
SamplesSSM092
Known GenesPRH1-PRR4, TAS2R46
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6876646
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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