A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6874850



Internal ID9924162
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:227571744..227572165hg38UCSC Ensembl
Outerchr1:227759445..227759866hg19UCSC Ensembl
Cytoband1q42.13
Allele length
AssemblyAllele length
hg38422
hg19422
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2724195
Supporting Variants
SamplesSSM092
Known GenesZNF678
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6874850
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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