A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6872429



Internal ID9921983
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:143843226..143964354hg38UCSC Ensembl
Outerchr4:144764379..144885507hg19UCSC Ensembl
Cytoband4q31.21
Allele length
AssemblyAllele length
hg38121129
hg19121129
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2728476, esv2728477
Supporting Variants
SamplesSSM091
Known GenesGYPE
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6872429
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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