A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6872108



Internal ID9921694
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:9993293..10047004hg38UCSC Ensembl
Outerchr3:10034977..10088688hg19UCSC Ensembl
Cytoband3p25.3
Allele length
AssemblyAllele length
hg3853712
hg1953712
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2724891
Supporting Variants
SamplesSSM091
Known GenesCIDECP, EMC3-AS1, FANCD2, LOC401052
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6872108
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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