A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6871224



Internal ID10267585
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:41083301..41104540hg38UCSC Ensembl
Outerchr17:39239553..39260792hg19UCSC Ensembl
Cytoband17q21.2
Allele length
AssemblyAllele length
hg3821240
hg1921240
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2715915
Supporting Variants
SamplesSSM090
Known GenesKRTAP4-7, KRTAP4-8
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6871224
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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