A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6871183



Internal ID9920862
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:89342040..89342160hg38UCSC Ensembl
Outerchr16:89408448..89408568hg19UCSC Ensembl
Cytoband16q24.3
Allele length
AssemblyAllele length
hg38121
hg19121
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2715149, esv2715147, esv2715151
Supporting Variants
SamplesSSM090
Known GenesANKRD11
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6871183
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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