A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6869657



Internal ID9919489
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:30240041..30240542hg38UCSC Ensembl
Outerchr6:30207818..30208319hg19UCSC Ensembl
Cytoband6p22.1
Allele length
AssemblyAllele length
hg38502
hg19502
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2731781, esv2731777
Supporting Variants
SamplesSSM090
Known GenesHCG17
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6869657
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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