A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6868871



Internal ID10265467
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:236038633..236038815hg38UCSC Ensembl
Outerchr1:236201933..236202115hg19UCSC Ensembl
Cytoband1q42.3
Allele length
AssemblyAllele length
hg38183
hg19183
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2725374, esv2725363
Supporting Variants
SamplesSSM090
Known GenesNID1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6868871
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer