A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6868862



Internal ID9918773
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:225815109..225815466hg38UCSC Ensembl
Outerchr1:226002811..226003168hg19UCSC Ensembl
Cytoband1q42.12
Allele length
AssemblyAllele length
hg38358
hg19358
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2723929
Supporting Variants
SamplesSSM090
Known GenesEPHX1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6868862
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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