A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6867158



Internal ID9917237
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:29691466..29693458hg38UCSC Ensembl
Outerchr12:29844399..29846391hg19UCSC Ensembl
Cytoband12p11.22
Allele length
AssemblyAllele length
hg381993
hg191993
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745688
Supporting Variants
SamplesSSM089
Known GenesTMTC1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6867158
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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