A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6866176



Internal ID9662139
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:94275579..94275866hg38UCSC Ensembl
Outerchr12:94669355..94669642hg19UCSC Ensembl
Cytoband12q22
Allele length
AssemblyAllele length
hg38288
hg19288
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2746226
Supporting Variants
SamplesSSM011
Known GenesPLXNC1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6866176
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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