A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6864170



Internal ID10261235
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:223636641..223636782hg38UCSC Ensembl
Outerchr1:223824343..223824484hg19UCSC Ensembl
Cytoband1q41
Allele length
AssemblyAllele length
hg38142
hg19142
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2723473, esv2723484
Supporting Variants
SamplesSSM089
Known GenesCAPN8
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6864170
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer