A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6863979



Internal ID10261064
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:36957724..36957974hg38UCSC Ensembl
Outerchr1:37423325..37423575hg19UCSC Ensembl
Cytoband1p34.3
Allele length
AssemblyAllele length
hg38251
hg19251
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2747052, esv2747041, esv2747030, esv2747018
Supporting Variants
SamplesSSM089
Known GenesGRIK3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6863979
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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