A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6863687



Internal ID10256871
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:55361640..55361749hg38UCSC Ensembl
Outerchr19:55873008..55873117hg19UCSC Ensembl
Cytoband19q13.42
Allele length
AssemblyAllele length
hg38110
hg19110
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718961, esv2718964
Supporting Variants
SamplesSSM088
Known GenesFAM71E2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6863687
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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