A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6863677



Internal ID9910194
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19_KI270938v1_alt:675154..675244hg38UCSC Ensembl
Outerchr19:55204040..55204134hg19UCSC Ensembl
Cytoband19q13.42
Allele length
AssemblyAllele length
hg3891
hg1995
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718900, esv2718901, esv2718898, esv2718902, esv2718896, esv2718894, esv2718872, esv2718899, esv2718903, esv2718904, esv2718893, esv2718897, esv2718905
Supporting Variants
SamplesSSM088
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6863677
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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