A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6863582



Internal ID9910279
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:19837439..20463527hg38UCSC Ensembl
Outerchr19:19948248..20646333hg19UCSC Ensembl
Cytoband19p12
Allele length
AssemblyAllele length
hg38626089
hg19698086
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718297
Supporting Variants
SamplesSSM088
Known GenesMIR1270-1, MIR1270-2, ZNF253, ZNF486, ZNF682, ZNF826P, ZNF90, ZNF93
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6863582
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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