A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6862306



Internal ID9911427
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:125183222..125183461hg38UCSC Ensembl
Outerchr11:125053118..125053357hg19UCSC Ensembl
Cytoband11q24.2
Allele length
AssemblyAllele length
hg38240
hg19240
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745195
Supporting Variants
SamplesSSM088
Known GenesPKNOX2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6862306
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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