A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6860766



Internal ID9912813
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:29918038..30003305hg38UCSC Ensembl
Outerchr6:29885815..29971082hg19UCSC Ensembl
Cytoband6p22.1
Allele length
AssemblyAllele length
hg3885268
hg1985268
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2731776
Supporting Variants
SamplesSSM088
Known GenesHCG4B, HCG9, HLA-A, ZNRD1-AS1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6860766
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer