A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6855517



Internal ID9906762
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:3708098..3708887hg38UCSC Ensembl
Outerchr7:3747730..3748519hg19UCSC Ensembl
Cytoband7p22.2
Allele length
AssemblyAllele length
hg38790
hg19790
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2733876, esv2733877
Supporting Variants
SamplesSSM087
Known GenesSDK1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6855517
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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