A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6852560



Internal ID9904100
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:79455725..79455799hg38UCSC Ensembl
Outerchr18:77215725..77215799hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg3875
hg1975
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2717647, esv2717648, esv2717497
Supporting Variants
SamplesSSM086
Known GenesNFATC1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6852560
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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