A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6851104



Internal ID9902789
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:2107350..2107501hg38UCSC Ensembl
Outerchr12:2216516..2216667hg19UCSC Ensembl
Cytoband12p13.33
Allele length
AssemblyAllele length
hg38152
hg19152
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2745406, esv2745407
Supporting Variants
SamplesSSM086
Known GenesCACNA1C
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6851104
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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