A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6850560



Internal ID9902300
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:136675397..136675503hg38UCSC Ensembl
Outerchr9:139569849..139569955hg19UCSC Ensembl
Cytoband9q34.3
Allele length
AssemblyAllele length
hg38107
hg19107
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2739381, esv2739382
Supporting Variants
SamplesSSM086
Known GenesAGPAT2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6850560
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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