A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6848639



Internal ID10247256
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:899872..899924hg38UCSC Ensembl
Outerchr5:899987..900039hg19UCSC Ensembl
Cytoband5p15.33
Allele length
AssemblyAllele length
hg3853
hg1953
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2729367, esv2729370, esv2729369
Supporting Variants
SamplesSSM086
Known GenesTRIP13
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6848639
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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