A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6846580



Internal ID9898718
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr18:79172242..79172571hg38UCSC Ensembl
Outerchr18:76932242..76932571hg19UCSC Ensembl
Cytoband18q23
Allele length
AssemblyAllele length
hg38330
hg19330
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2717624, esv2717497
Supporting Variants
SamplesSSM085
Known GenesATP9B
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6846580
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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