A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6839621



Internal ID9892643
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:5274566..5274710hg38UCSC Ensembl
Outerchr19:5274577..5274721hg19UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg38145
hg19145
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718041, esv2718042
Supporting Variants
SamplesSSM083
Known GenesPTPRS
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6839621
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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