A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6838837



Internal ID10238623
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:112845260..112845737hg38UCSC Ensembl
Outerchr13:113499574..113500051hg19UCSC Ensembl
Cytoband13q34
Allele length
AssemblyAllele length
hg38478
hg19478
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2748198, esv2748200
Supporting Variants
SamplesSSM083
Known GenesATP11A
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6838837
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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