A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6836180



Internal ID10236231
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:7499417..7500004hg38UCSC Ensembl
Outerchr1:7559477..7560064hg19UCSC Ensembl
Cytoband1p36.23
Allele length
AssemblyAllele length
hg38588
hg19588
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2741917, esv2741472
Supporting Variants
SamplesSSM083
Known GenesCAMTA1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6836180
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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