A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6828096



Internal ID9882083
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:34434491..34580649hg38UCSC Ensembl
Outerchr15:34726692..34872850hg19UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg38146159
hg19146159
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2749555, esv2749550, esv2749548, esv2749553
Supporting Variants
SamplesSSM080
Known GenesGOLGA8A, GOLGA8B, MIR1233-1, MIR1233-2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6828096
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer