A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6827591



Internal ID9881628
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:58862991..59075919hg38UCSC Ensembl
Outerchr11:58630464..58843392hg19UCSC Ensembl
Cytoband11q12.1
Allele length
AssemblyAllele length
hg38212929
hg19212929
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2744557
Supporting Variants
SamplesSSM080
Known GenesGLYATL1, LOC283194
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6827591
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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