A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6825610



Internal ID9660990
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:31252092..31344611hg38UCSC Ensembl
Outerchr6:31219869..31312388hg19UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg3892520
hg1992520
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2731814, esv2731815, esv2731812, esv2731817
Supporting Variants
SamplesSSM010
Known GenesHLA-C
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6825610
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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