A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6818295



Internal ID10220898
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:87408522..87408593hg38UCSC Ensembl
Outerchr6:88118240..88118311hg19UCSC Ensembl
Cytoband6q15
Allele length
AssemblyAllele length
hg3872
hg1972
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2732390, esv2732388
Supporting Variants
SamplesSSM078
Known GenesC6orf165
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6818295
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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