A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6815588



Internal ID9870824
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:46145623..46145940hg38UCSC Ensembl
Outerchr13:46719758..46720075hg19UCSC Ensembl
Cytoband13q14.13
Allele length
AssemblyAllele length
hg38318
hg19318
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2747356, esv2747343, esv2747347
Supporting Variants
SamplesSSM077
Known GenesLCP1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6815588
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer