A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6814821



Internal ID9658491
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr19:52813446..52816740hg38UCSC Ensembl
Outerchr19:53316699..53319993hg19UCSC Ensembl
Cytoband19q13.41
Allele length
AssemblyAllele length
hg383295
hg193295
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2718798, esv2718787, esv2718796, esv2718800, esv2718801, esv2718786, esv2718799
Supporting Variants
SamplesSSM009
Known GenesZNF28
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6814821
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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