A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6808989



Internal ID9863809
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:21193406..21211942hg38UCSC Ensembl
Outerchr9:21193405..21211941hg19UCSC Ensembl
Cytoband9p21.3
Allele length
AssemblyAllele length
hg3818537
hg1918537
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2738276, esv2738274
Supporting Variants
SamplesSSM075
Known GenesIFNA10, IFNA7
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6808989
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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