A curated catalogue of human genomic structural variation




Variant Details

Variant: essv6806701



Internal ID10208779
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:71589230..71590628hg38UCSC Ensembl
Outerchr15:71881569..71882967hg19UCSC Ensembl
Cytoband15q23
Allele length
AssemblyAllele length
hg381399
hg191399
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsesv2749850
Supporting Variants
SamplesSSM074
Known GenesTHSD4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)essv6806701
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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